The 2006–07 FA Trophy was the thirty-eighth season of the FA Trophy.
Preliminary round
Ties Replays ==First qualifying round==
First qualifying round
Ties Replays ==Second qualifying round==
Second qualifying round
Ties Replays ==Third qualifying round==
Third qualifying round
The teams from Conference North and Conference South entered in this round. Ties Replays ==First round==
First round
The teams from Conference National entered in this round. Ties Replays ==Second round==
Fourth round
• Ties played on 24 and 25 February 2007. {{football box ----{{football box ----{{football box ----{{football box ==Semi-finals==
Semi-finals
• The two-legged ties were played on 10 and 17 March 2007. First legs {{football box ---- {{football box Second legs {{football box Kidderminster win 4–3 on aggregate ---- {{football box Stevenage win 3–1 on aggregate ==Final==