The Inter Baku 2013–14 season was Inter Baku's thirteenth Azerbaijan Premier League season, and their fifth season under manager Kakhaber Tskhadadze. They started the season competing in the 2013–14 UEFA Europa League, defeating Mariehamn before losing to Tromsø in the second qualifying round. They reached the Quarterfinals of the Azerbaijan Cup, losing to Neftchi Baku, and finished 2nd in the League.