The draw for the quarter-finals and the remaining knockout rounds took place at
Kuala Lumpur, Malaysia on June 29, 2009.
First leg {{football box ---- {{football box ---- {{football box ---- {{football box
Second leg {{football box
Pohang Steelers won 5–4 on aggregate. ---- {{football box
Nagoya Grampus won 4–3 on aggregate. ---- {{football box
Umm-Salal won 4–3 on aggregate. ---- {{football box
Al-Ittihad won 5–1 on aggregate. ==Semi-finals==