The number of autosomal chromosomes an
organism has can vary across
species and
cell types. They are typically identified by sequential numbers beginning with 1 (as opposed to the
sex chromosomes which are indicated by letters). In
diploid organisms, a
somatic cell will contain two copies of each autosomal chromosome, one from each parent while
germline cells (
eggs or
sperm) will typically contain a single copy of each autosome. The
homologous chromosome pairs are identified with the same number (e.g. a somatic cell will have two copies of
chromosome 1, two copies of
chromosome 2...).
Humans The
human genome contains 44 autosomal chromosomes, or as a diploid organism, 22 pairs of homologous autosomes that are numbered 1-22. These autosome pairs were labeled with numbers (1–22 in humans) roughly in order of their sizes in base pairs. All human autosomes have been identified and mapped by extracting the chromosomes from a
cell arrested in
metaphase or
prometaphase and then
staining them with a type of dye (most commonly,
Giemsa). These chromosomes are typically viewed as
karyograms for easy comparison.
Clinical geneticists can compare the karyogram of an individual to a reference karyogram to discover the cytogenetic basis of certain
phenotypes. For example, the karyogram of someone with
Patau Syndrome would show that they possess three copies of
chromosome 13. Karyograms and staining techniques can only detect large-scale disruptions to chromosomes—chromosomal aberrations smaller than a few million base pairs generally cannot be seen on a karyogram. Autosomes still contain sexual determination
genes even though they are not sex chromosomes. For example, mutations of the
SOX9 gene on
chromosome 17 can cause humans with a typical Y chromosome to develop as females. The transcription factor
TDF (encoded by the
SRY gene on the Y sex chromosome), a protein vital for male sex determination during development, functions by activating SOX9 and that the mutation on SOX9 causes the gene to be activated without the TDR transcription factor.
Yeast The
yeast (
S. cerevisiae) genome has 16 chromosomes in its
haploid state (32 in its diploid state). However, unlike other organisms, they are officially numbered with roman numerals (I to XVI). As an organism being studied before the development of technologies for directly observing and counting chromosomes, their chromosome numbering was based on the order of their discovery in the 1950's rather than by their lengths. When the entire genome was published in 1996 as the first eukaryote to have its entire genome
sequenced, the roman numeral-based naming convention was continued by naming each assembled chromsome in the
reference "chrI", "chrII", ... "chrVXI." == Autosomal genetic disorders ==