The ecology of the bathypelagic ecosystem is constrained by its lack of sunlight and
primary producers, with limited production of microbial biomass via autotrophy. The
trophic networks in this region rely on
particulate organic matter (POM) that sinks from the
epipelagic and
mesopelagic water, and oxygen inputs from the
thermohaline circulation. Despite these limitations, this open-ocean ecosystem is home to
microbial organisms,
fish, and
nekton.
Microbial ecology ,
Crenarchaeaota are linked to dissolved inorganic
carbon fixation. A comprehensive understanding of the inputs driving the microbial ecology in the bathypelagic zone is lacking due to limited observational data, but has been improving with advancements in deep-sea technology. A majority of our knowledge of ocean
microbial activity comes from studies of the shallower regions of the ocean because it is easier to access, and it was previously assumed that deeper water did not have suitable physical conditions for diverse microbial communities. The bathypelagic zone receives inputs of organic material and
POM from the surface ocean on the order of 1-3.6 Pg C/year.
Prokaryote biomass in the bathypelagic is dependent and thus correlated with the amount of sinking
POM and
organic carbon availability. These essential organic carbon inputs for microbes typically decrease with depth as they are utilized while sinking to the bathypelagic. Some archaea like
Crenarchaeota have Crenarchaeota 16S rRNA and archaeal amoA gene abundances correlated to
dissolved inorganic carbon (DIC) fixation. The utilization of
DIC is thought to be fueled by the oxidation of
ammonium and is one form of chemoautotrophy. Based on regional variation and differences in prokaryote abundance,
heterotrophic prokaryote production, and
particulate organic carbon (POC) inputs to the bathypelagic zone. Research to quantify bacterial-consuming grazers, like
heterotrophic
eukaryotes, has been limited by difficulties in sampling. Oftentimes organisms do not survive being brought to the surface due to experiencing drastic pressure changes in a short amount of time. Work is underway to quantify cell abundance and biomass, but due to poor survival, it is difficult to get accurate counts. In more recent years there has been an effort to categorize the diversity of the eukaryotic assemblages in the bathypelagic zone using methods to assess the genetic compositions of microbial communities based on supergroups, which is a way to classify organisms that have common ancestry. Some important groups of bacterial grazers include
Rhizaria,
Alveolata,
Fungi,
Stramenopiles,
Amoebozoa, and
Excavata (listed from most to least abundant), with the remaining composition classified as uncertain or other.
Viruses influence biogeochemical cycling through the role they play in
marine food webs. Their overall abundance can be up to two orders of magnitude lower than the
mesopelagic zone, however, there is often high viral abundance found around deep-sea
hydrothermal vents. The magnitude of their impacts on biological systems is demonstrated by the varying range of viral-to-prokaryote abundance ratios ranging from 1-223, this indicates that there are the same amount or more viruses than prokaryotes. In contrast to organisms in the water column,
benthic organisms in this region tend to have limited to no
bioluminescence. The bathypelagic zone contains
sharks,
squid,
octopuses, and many species of fish, including deep-water
anglerfish,
gulper eel,
amphipods, and
dragonfish. The fish are characterized by weak muscles, soft skin, and slimy bodies. The adaptations of some of the fish that live there include small eyes and transparent skin. However, this zone is difficult for fish to live in since food is scarce; resulting in species evolving slow metabolic rates in order to conserve energy. Occasionally, large sources of organic matter from decaying organisms, such as
whale falls, create a brief burst of activity by attracting organisms from different bathypelagic communities. Instead, the migration of bathypelagic organisms is driven by other factors, most of which remain unknown. Some research suggests the movement of species within the overlying
pelagic region could prompt individual bathypelagic species to migrate, such as
Sthenoteuthis sp., a species of
squid. In this particular example,
Sthenoteuthis sp. appears to migrate individually over the course of ~4–5 hours towards the surface and then form into groups. In addition, the vertical migrating species' timing bathypelagic appears linked to the
lunar cycle. However, the exact indicators causing this timing are still unknown. == Research and exploration ==