The earliest attestation to the monastery's existence is a papal bull of 1222. The abbey church was consecrated in 1267. At this period it was a monastery for
Cistercian nuns. In 1413 the community of nuns was disbanded, and by 1461 the Cistercian Order had redesignated the property as a monastery for monks. The house was briefly evacuated in 1480-1483 due to an outbreak of plague. In November 1568, early in the
Dutch Revolt, the abbey and its church were set on fire by rebel forces. The community fled and the abbot, Cornelis Lievens, died in
Leuven in 1569. Rebuilding began in 1589, and the church was reconsecrated in 1617 by
Jean Dauvin,
bishop of Namur. The monastery was on the front lines of the
War of the Spanish Succession, just a few miles from
Ramillies, and suffered depredations and damage accordingly. Fresh rebuilding work was completed in 1711. After the French invasion of the Southern Netherlands, the revolutionaries suppressed Boneffe Abbey along with all other religious houses. ==References==