Cinnamycin has a compact globular structure and composed of following general amino acid sequence: :Ala-Arg-Gln-Ala-Ala-Ala-Phe-Gly-Pro-Phe-Abu-Phe-Val-Ala-Asp-Gly-Asn-Abu-Lys The backbone
amino acid residues are linked through four bridges including one mesolanthionine (Lan), two (2
S,3
S,6
R)-3-methyllanthionines (MeLan) and one (2
S,8
S)-lysinoalanine (LysAla) bridge. Side chain crosslinking of
serine and
threonine with
cysteine yields mesolanthionine(Lan) and methyllanthionine (MeLan) respectively. The presence of these thiol bridges along with lysinoalanine bridge makes cinnamycin one of the smallest peptides with a well-organized three dimensional structure. Based on
NMR experiments, the binding pocket of cinnamycin consists of 7-14
amino acid residues which can accommodate the substrate
phosphatidylethanolamine (PE). This smaller size of the binding pocket makes cinnamycin specific for its receptor (PE). However the function of erytho-3-hydroxy-L-aspartic acid (HyAsp) at residue 15, is not very pronounced. The peptides
duramycin and
ancovenin can also be considered to belong to the family of cinnamycin. These peptides also consist of a similar structure to cinnamycin as globular 19 aa peptides with one Lan, two MeLan and an unusual lysinoalanine bridge between Lys-19 and Ser-6. They also exhibit a modification in position 15, an aspartate hydroxylation yielding the erythro-3-hydroxy-aspartic acid. Among the cinnamycin group, ancovenin is the most different variant since it does not possess the aspartate 15 modification and the lysine-alanine bridge. == Receptor–molecule interactions ==