The crystal darter is susceptible to a number of threats including
overexploitation,
habitat degradation through
pollution and
siltation, and habitat modification through stream flow alterations and artificial
impoundment. This habitat requirement makes them sensitive to activities that cause pollution and siltation, such as
mining,
logging,
natural gas exploration and extraction, and agriculture. Because crystal darters are geographically confined to a few freshwater systems with clear, fast-moving water they are particularly vulnerable to extinction when their limited habitat is degraded. High concentrations of fine sediment can also affect fish by reducing their rate of growth, decreasing their tolerance to disease or directly killing them by clogging
gill rakers and filaments. Siltation also reduces the suitability of critical spawning habitat, and thus hinders the stability and growth of future populations. Siltation is particularly threatening to the crystal darter, because it relies on clean sand and gravel habitats to reproduce. In addition, natural fish migration patterns can be modified when certain areas of this route become uninhabitable. Finally, siltation negatively affects the efficiency of hunting in visual feeders, such as the crystal darter. ==Conservation==