The genus
Endocena was established by the Scottish lichenologist
James Mascall Morrison Crombie in 1876, based on a specimen collected on the west coast of Chile. The
type species,
Endocena informis, was distinguished from
Siphula by its hollow
thallus structure. Crombie included this single species in the genus and highlighted its similarities to
Siphula while noting the key difference of a hollow thallus. This relationship and the genus's placement within the family
Icmadophilaceae were later confirmed by
Soili Stenroos and colleagues in 2002. In examining the extensive lichen collections from southern South America, several collections from the Falkland Islands and Isla de los Estados were found to resemble
E. informis but differed in being and having a thallus composed of flat to convex . These collections were chemically similar to
E. informis, both containing
thamnolic acid. Further
molecular studies aimed to confirm the placement of this new sorediate taxon within
Endocena, revealing that both it and
E. informis were
congeneric with the recently proposed genus
Chirleja. This new taxon was
morphologically distinct but genetically similar, leading to the proposal to
synonymise Chirleja under
Endocena. Molecular data, including
ITS and mitochondrial small subunit sequences, showed that members of
Endocena and
Chirleja form a supported
monophyletic group within the Icmadophilaceae. Despite the genetic uniformity, significant morphological differences were observed among the taxa, leading to the recognition of distinct species and
varieties within the genus. As a result, the genus
Chirleja was synonymised under
Endocena, with
Endocena buckii (formerly
Chirleja buckii) and
Endocena informis var.
falklandica (a sorediate taxon from the Falkland Islands) being formally recognised. ==Description==