High-energy phosphate bonds are usually
pyrophosphate bonds, acid
anhydride linkages formed by taking
phosphoric acid derivatives and dehydrating them. As a consequence, the
hydrolysis of these bonds is
exergonic under physiological conditions, releasing
Gibbs free energy. Except for PPi → 2 Pi, these reactions are, in general, not allowed to go uncontrolled in cells but are instead coupled to other processes needing energy to drive them to completion. Thus, high-energy phosphate reactions can: • provide energy to cellular processes, allowing them to run • couple processes to a particular nucleoside, allowing for regulatory control of the process • drive a reaction out of equilibrium (drive it
to the right) by promoting one direction of the reaction faster than the equilibrium can relax. The one exception is of value because it allows a single hydrolysis, ATP + H2O → AMP + PPi, to effectively supply the energy of hydrolysis of two high-energy bonds, with the hydrolysis of PPi being allowed to go to completion in a separate reaction. The AMP is regenerated to ATP in two steps, with the equilibrium reaction ATP + AMP ↔ 2ADP, followed by regeneration of ATP by the usual means,
oxidative phosphorylation or other energy-producing pathways such as
glycolysis. Often, high-energy phosphate bonds are denoted by the character '~'. In this "squiggle" notation, ATP becomes A-P~P~P. The squiggle notation was invented by
Fritz Albert Lipmann, who first proposed ATP as the main energy transfer molecule of the cell, in 1941. Lipmann's notation emphasizes the special nature of these bonds. Stryer states: The term 'high energy' with respect to these bonds can be misleading because the negative free energy change is not due directly to the breaking of the bonds themselves. The breaking of these bonds, like the breaking of most bonds, is
endergonic and consumes energy rather than releasing it. The negative
free energy change comes instead from the fact that the bonds formed after hydrolysis - or the
phosphorylation of a residue by ATP - are lower in energy than the bonds present before hydrolysis. (This includes
all of the bonds involved in the reaction, not just the phosphate bonds themselves). This effect is due to a number of factors including increased
resonance stabilization and
solvation of the products relative to the reactants, and destabilization of the reactants due to electrostatic repulsion between neighboring phosphorus atoms. == References ==