Thames was recommissioned in December 1796 under Captain
William Lukin and in June sailed for Jamaica. In April–May 1797 she was caught up in the
Spithead and Nore mutinies. However, Lukin managed her well during this period and she was one of the first vessels to sail after the suppression of the mutiny. In the second half of 1797,
Thames captured a small barge of one gun, name unknown, on the
Jamaica station. On 16 January 1801,
Thames recaptured
Eliza, Brown, master, which the French privateer
Uncle Thomas had captured.
Thames sent
Eliza into Plymouth. On 12 May 1800,
Thames, and the hired armed cutter
Suwarrow captured a French
chasse maree, name unknown. On 1 June,
Thames was a part of a squadron detached from Channel fleet to
Quiberon Bay and the Morbihan. On 4 June
Thames, and some smaller vessels attacked the south-west end of Quiberon where the silenced the forts, which a landing party of troops later destroyed. On 26 October
Thames encountered a French privateer at about 9:30 in the morning.
Thames pursued her quarry for five hours. During the pursuit they came upon , which joined in. The two British vessels finally captured the ship
Diable à Quatre some from the
Cordouan lighthouse. She was armed with sixteen 6 and 12-pounder guns and had a crew of 150 men. She was only one day out of Bordeaux. The Royal Navy took her into service as . On 26 or 29 October,
Thames and
Immortalite chased a French
letter of marque schooner all day. They finally captured her and found that she had been sailing from Guadaloupe to Bordeaux with a cargo of coffee. She was the schooner
Unique. A little over a month later, on 30 November she captured another French privateer in the Bay of Biscay after a six-hour pursuit. The prize,
Actif, was armed with fourteen 6-pounder and two brass 12-pounder guns. She had a crew of 137 men and this was the first day of her first cruise. From her, Captain Lukin learned that in the previous three months only two British prizes had come into French or Spanish ports, one into Rochelle and one into
Passage. The Royal Navy took
Aurore into service as
HMS Charwell. Captain
Aiskew Paffard Hollis took command of
Thames in June. On 5 July she became becalmed while trying to recall to join the squadron under Rear Admiral Sir
James Saumarez. On 8 July she observed a Franco-Spanish squadron of six sail of the line prepare to sail the next day for
Algeciras, and sailed to Gibraltar to warn the admiral.
, Antoine Léon Morel-Fatio. Thames'' is in the right foreground. Three days later
Thames was part of Saumarez's squadron, which left Gibraltar to chase a Franco-Spanish squadron observed sailing from Algeciras.
Thames took a minor part in the subsequent
Battle of Algeciras Bay. The engagement resulted in the destruction of two
first rates, and the capture of a
third rate. In subsequent months, assisted by the
sloop-of-war , which had also participated in the battle, she destroyed a number of the enemy's coasters in the bay of
Estepona. ==Fate==