On June 4, 1796, he was married Elizabeth Havens (1773–1868), daughter of James Havens of Shelter Island. Together, they were the parents of seven children, including: •
David Thompson (1798–1871), who served as President of the
New York Life Insurance and Trust Company who married Sarah Diodati Gardiner, a daughter of John Lion Gardiner, 7th Lord of the Manor of Gardiner's Island. • Junius Thompson, who died young. • Elizabeth Thompson, who married Alonzo Brown, Esq. • Dr. Abraham Gardiner Thompson (b. 1816). Thompson died in New York City on December 30, 1846.
Descendants Through his daughter Mary, he was the grandfather of Sarah Griswold Gardiner (1848–1927), who married
John Alexander Tyler (1848–1883), second son of President
John Tyler and his second wife,
Julia Gardiner Tyler. ==Sources==