Lake Tanganyika sardines undergo vertical migrations, spending the day in tight shoals in deep water, rising to the surface at dawn and dusk while spending the remainder of the night dispersed widely throughout the
pelagic waters, although in Lake Kivu the fish move to the surface during the early morning and late afternoon. It is thought that these movements follow those of its food source,
zooplankton but in Lake Kariba they do not. It seems that the fish and the plankton are responding to the same stimuli meaning that they occur in the same locations at similar times. One theory is that this may be a reaction to light intensity and be protection against predators, similar to that reported in marine clupeids. The depth used by Lake Tanganyika sardines is determined by the depth of the thermocline and the amount of dissolved oxygen. Below the thermocline, the water is normally anoxic and from November to April the fish are found no deeper than . Adults migrate into deeper water as they grow larger, with the smaller, young fish preferring clear water of around deep with a rocky or sandy bottom and also occur in areas with steep shores. The adults move into the shallows to breed, this is usually during the rainy season and peaks in May and June and again in December and January but has been recorded throughout the year. The fecundity of these fish increases as they grow; in samples from Lake Kariba a fish which was in length had 600 eggs while another measuring had 14,044 eggs. In Lake Tanganyika fish had higher fecundity and a fish sampled there of had 55,000 eggs. The main breeding season in Kariba is from about September to February, the population will generally increase steadily from February to August and then fall because of high mortality and decreased recruitment. Lake Tanganyika sardines are omnivorous, feeding mainly on zooplankton and
phytoplankton. In Lake Kariba studies over time have shown that they opportunistically feed on the most abundant prey at any given time and different samples have shown the main prey to be
Bosmina longirostris,
Mesocyclops spp and
Ceriodaphnia dubia. Lake Tanganyika sardines may have caused a decline in the abundance of some larger zooplankton species, e.g.
Diaptomus,
Ceriodaphnia and
Diaphanosoma, which were more abundant in Lake Kariba prior to 1971 but as no stomach contents were sampled then we cannot be certain what caused their decline. In Lake Tanganyika prey has been recorded as
atyid shrimps, also
copepods and
prawns but larger fish have been known to prey on the larva of the
Lake Tanganyika sprat. Other food items include insects, such as
chironomids,
ephemeroptera,
trichoptera and
hemiptera and in some Lake Kariba samples these formed 55% of the stomach contents sampled and it is indicated by these samples that these prey items are taken on the surface at night. In Lake Kivu cannibalism appears to be common and is suspected in the Lake Kariba population but these may also prey on other fish species, unidentified fish remains have been recorded in Kariba samples and a specimen of the Southern mouth-brooder
Pseudocrenilabrus philander has been found in the stomach of specimen in Lake Kariba. ==Evolutionary history==