Muyoti began his journey to coaching when, at the end of the 2011 season at
AFC Leopards, he was named the assistant coach, then team manager, and back as an assistant. He left the club towards the end of 2013 to join
Oserian FC as head coach before returning to
AFC Leopards in 2016 as an assistant coach. He moved to
Zetech University at the onset of 2017 for a short stint before heading to
Thika United as an assistant coach first, then head coach. Head coach roles at
Nzoia Sugar,
Kakamega Homeboyz then to his current station
Nairobi City Stars then followed. In mid January 2025 he moved to Kenyan second tier side
Nairobi United and went on to complete an unprecedented double in winning the Super League title and earning the team promotion to the
Kenyan Premier League before topping it up with the domestic Cup,
Mozzart Bet Cup, to book a place in the
2025–26 CAF Confederation Cup. ==Career statistics==