The game starts with Sam ruining his appetite by eating cookies until the remaining cookies become sentient and escape to Sam's pantry. After finding and putting on his cape, Sam follows the cookies there, only to fall into an island populated by anthropomorphic foods called Moptop, where he participates in a political party called S.S.A.M. (Snacks and Sweets Aggressive Majority), which plans to take over the island. After inadvertently offending the participants by talking about his dinner, Sam is jailed and meets his cellmate named Florette, who is a
peace conference delegate at a building called the
Food Pyramid. Sam and Florette soon escape their cell and head over to said building. At the Pyramid, a carrot (that Sam met in
the first game), reveals to Sam that he arranged the conference to prevent a
general officer named Beetfoot from declaring war against the sweets, but four out of six delegates still aren't present: Chuck Cheddar (of the
Dairy food group), Bean 47 (of the
Protein food group), Granny Smythe (of the
Fruits food group) and Pierre Le Pain (of the
Grains food group); other than Florette, the only delegate to arrive was a lollipop named Luke Wigglebig, who is not part of the Sweet Troops. Sam agrees to find the four missing delegates and send them right to the conference. After Sam rescues all of the delegates, he checks up on them at the conference. There, he finds that an argument has ensued over which food group is the best. Overwhelmed by all the fighting, Sam intervenes and gives a speech on how "
no food is an island" and that they can work together to create new and better foods. The delegates gladly agree and General Beetfoot happily declares eternal peace on Moptop. While the delegates celebrate the agreement they've reached, Sam realizes that he's missed dinner. ==Gameplay==