Entrainment to environmental cycles is a trait with advantages, and is thus found in nearly all organisms. Many ecological relationships such as predator-prey interactions, pollinator behaviors, migration timing all require the synchronization of an organism's biological clock with the 24-hour rhythm of planet. Individuals who are not entrained, or in other words are not synchronized to the cycle of day and night, may miss out on feeding opportunities, on mating opportunities, etc, which may impact their chances of survival. The known models of both the circadian clock and mechanism of entrainment vary in different organisms across domain and kingdom, and the behavioral significance of entrainment vary as well.
Photoentrainment in mammals Mammals, in order to survive, must wake up at specific times in order to secure meals and avoid becoming prey themselves. In mammals, the external light dark cycle entrains a master clock, which then synchronizes various circadian oscillators throughout the body known as peripheral clocks. In addition to melanopsin, studies have determined from using melanopsin-knockout mice that
rods and
cones can also play a role in the photic responses of the SCN.
Photoentrainment in cyanobacteria Photoautotrophic cyanobacteria depend on sunlight for energy, so a failure to anticipate nighttime would threaten their ability to survive and reproduce. They need sufficient
glycogen reserves to last through the night. Photoentrainment also allows cyanobacteria to respond to light properly so as to prepare their photosynthetic apparatus for dawn when blue light is prominent. Appropriate synchronization to light also facilitates the temporal separation between oxygen-sensitive nitrogen fixation and oxygen-generating photosynthesis, lest the latter would inhibit the former. Cyanobacteria can entrain to light pulses at a single cell level, but not all strains of the cyanobacteria entrain to light. While some cyanobacteria show rhythmic photosynthesis in constant light conditions, others exhibit constitutive photosynthetic activity in constant light conditions, measured by the levels of photosynthetic oxygen evolution.
Photoentrainment in fungi Fungi, like mammals, use a TTFL-driven clock, and therefore their entrainment involves adjustments to the concentrations of certain clock proteins based on environmental stimuli. More specifically, blue light induces transcription of frequency gene
frq via photoreceptor WC‐1 and its partner
WC‐2, and the protein product FRQ subsequently regulates the activity of WC-1 and WC-2 via
phosphorylation. Ultraviolet radiation and other light wavelengths can cause DNA damage and
mutations in fungi. Since DNA replication requires chromosome unwinding and exposes the DNA molecule to UV damage, fungi need to schedule DNA replication during the time of the day with the lowest UV radiation. == Clinical implications ==