Mechanism of action Acarbose inhibits enzymes (
glycoside hydrolases) needed to digest
carbohydrates, specifically,
alpha-glucosidase enzymes in the brush border of the small intestines, and pancreatic
alpha-amylase. It locks up the enzymes by mimicking the
transition state of the substrate with its amine linkage. However, bacterial alpha-amylases from gut microbiome are able to degrade acarbose.
Metabolism Acarbose degradation is the unique feature of
glycoside hydrolases in
gut microbiota, acarbose degrading
glucosidase, which hydrolyze acarbose into an acarviosine-glucose and glucose. Human enzymes do transform acarbose: the pancreatic alpha-amylase is able to perform a
rearrangement reaction, moving the glucose unit in the "tail" maltose to the "head" of the molecule. Analog drugs with the "tail" glucose removed or flipped to an α(1-6) linkage resist this transformation. A
cyclomaltodextrinase (CDase) from gut bacteria
Lactobacillus plantarum degraded acarbose via two different modes of action to produce maltose and
acarviosin, as well as glucose and acarviosine-glucose, suggest that acarbose resistance is caused by the human microbiome. The microbiome-derived acarbose kinases are also specific to phosphorylate and inactivate acarbose. The molecular modeling showed the interaction between gut bacterial acarbose degrading glucosidase and human α-amylase. ==Natural distribution==