Excavata are considered primitive eukaryotes. They are characterized by a feeding groove with a posteriorly located flagella, which allows them to create a current that captures small food particles. The cytostome is the specialized structure that allows the protists this function. This supergroup
Excavata includes the subgroups
Diplomonads (Fornicata),
Parabasalids, and
Euglenozoans.
Diplomonads Diplomonads used to be defined as
Fornicata, but their characteristics remain the same despite their renaming. They are microaerophilic protists.
Diplomonads were previously defined by the lack of a mitochondrion, but recent studies have found that they have a nonfunctional, mitochondrial remnant organelle called a mitosome. Most are harmless except for
Giardia,
Hexamita salmonis, and
Histomonas meleagridis.
Giardia causes diarrhea,
Hexamita salmonis is a fish parasite, and
Histomonas meleagridis is a turkey pathogen.
Giardia intestinalis is a human pathogen, which is transmitted by cyst-contaminated water. It causes epidemic diarrhea from contaminated water. One can tell one may be infected by the observation of cysts or
trophozoites in stools and ELISA (enzyme-linked immunosorbent assay) test. To prevent contamination, avoid any possibly contaminated water, and if contaminated water is the only thing available to drink, a slow sand filter should be used. A study found that the chlorination of water and nutritional intervention had no effect on childhood giardia infection. Only handwashing and hygienic sanitation interventions reduced infection rates in children.
Hexamita salmonis is a common flagellated fish pathogen. Infected fish are weak and emaciated, and typically swim on their sides.
Histomonas meleagridis is a common bird pathogen that causes histomoniasis. Signs of histomoniasis include reduced appetite, drooping wings, unkempt feathers, and yellow fecal droppings.
Parabasilia Most
Parabasalia are flagellated endosymbionts of animals. They lack a distinct cytostome, which means they must use phagocytosis to engulf food. There are two subgroups:
Trichonympha and
Trichomonadida.
Trichonympha are obligate mutualists of wood-eating insects such as termites. They secrete cellulase, which is used for digesting wood. The next subgroup,
Trichomonadida, does not require oxygen and possesses hydrogenosomes. They only reproduce through asexual reproduction and some strains are human pathogens. There are three types of pathogenic parabasalia:
Trichomonas foetus, Dientamoeba fragilis, and
Trichomonas vaginalis.
Trichomonas foetus causes spontaneous abortion in cattle,
Dientamoeba fragilis causes diarrhea in humans, and
Trichomonas vaginalis is a sexually transmitted disease. Various imidazoles have been used to treat infected bulls, but none are safe and effective. Ipronidazole is probably most effective but it frequently causes sterile abscesses at injection sites.
Dientamoeba fragilis is a parasite that lives in the large intestine of humans. No one knows how
D. fragilis is spread; one possibility is from swallowing contaminated water or food. Many people who are infected with this parasite show no signs of being infected. Sometimes the infection can be observed; the most common symptoms include diarrhea, stomach pains, loss of appetite, nausea, and fatigue.
Trichomonas vaginalis is a sexually transmitted disease. Men who are infected rarely show any symptoms (asymptomatic). Women who are infected usually show signs of soreness, inflammation, and redness around the vagina and a possible change in vaginal discharge.
Trichomonas vaginalis can be treated with a course of antibiotics.
Euglenozoa Most Euglenozoa are
photoautotrophic, but some are
chemoorganotrophs (saprophytic). They are commonly found in freshwater. The members of the phylum Euglenozoa have a
pellicle for support, a red eye spot called a stigma to orient the cell toward light, chlorophyll a and b to assist in the process of photosynthesis, contractile vacuoles, and flagella. One major pathogen from the phylum Euglenozoa is
Leishmania. Leishmania causes leishmaniasis. The symptoms of leishmaniasis include systemic and skin/membrane damage. Leishmania parasites spread by phlebotomine sand flies in the tropics, subtropics, and southern Europe. They may manifest cutaneously (cutaneous leishmaniasis) as skin sores with as scab a few weeks after the bite or internally (visceral leishmaniasis), affecting the organs, which can be life-threatening. Cutaneous leishmaniasis can spread to the mucous membranes and cause mucosal leishmaniasis even years after the initial infection. Cutaneous leishmaniasis heals on its own and leaves bad scars. Only FDA approved for visceral leishmaniasis is amphotericin B and oral miltefosine for cutaneous and mucosal leishmaniasis diagnosis- tissue specimen, bone marrow, blood tests detect antibody to parasite for visceral leishmaniasis. The second pathogen from this phylum is
Trypanosoma cruzi.
Trypanosoma cruzi causes Chagas disease and is transmitted by the reduviid bug, also known as the "kissing bug." Chagas disease is diagnosed using a physical exam and blood test. The only treatment includes antiparasitics only from the CDC, which are not FDA approved. Acute Chagas disease has a quick onset, the trypanosomes enter the bloodstream, they become amastigotes, and replicate. Acute Chagas disease can be treated using benznidazole or nifurtimox. Chronic chagas disease is asymptomatic and causes heart and gastrointestinal cells to be affected. Currently, there are only investigational treatments for this disease. Unfortunately, vaccines are not effective with Chagas disease due to
antigenic variation. This pathogen causes damage to the nervous system.
African Sleeping Sickness is caused by
Trypanosoma brucei rhodensiense and Trypanosoma brucei gambiense, and is transmitted by the tsetse fly. It is diagnosed by a physical exam and blood test. African sleeping sickness causes interstitial inflammation, lethargy, brain swelling, and death within one to three years. Drug therapy, using Eflornithine and Melarsoprol Pentamidine for
T. gambiense and Suramin (Antrypol) for either
Trypanosoma brucei rhodensiense and Trypanosoma brucei gambiense, or combinations of these medications, can help treat this disease, but vaccines can not be used due to antigenic variation. ==Supergroup
Amoebozoa==