•
Saalach •
Saale •
Sagwasser •
Sailaufbach •
Salzach •
Sälzerbach •
Salzersgraben •
Sandrach •
Sauerbach •
Saußbach •
Schambach •
Schandtauber •
Schießbach •
Schlangenbach, tributary of the Altmühl •
Schlangenbach, tributary of the Regnitz •
Schlierach •
Schlossauer Ohe •
Schloßgrundgraben •
Schmerbach •
Schmerlenbach •
Schmutter •
Schnaittach •
Schneppenbach •
Schönach •
Schondra •
Schorgast •
Schutter •
Schwabach, tributary of the Rednitz •
Schwabach, tributary of the Regnitz •
Schwabinger Bach •
Schwabinger Eisbach •
Schwarzach, tributary of the Altmühl •
Schwarzach, tributary of the Main •
Schwarzach, tributary of the Naab •
Schwarzach, tributary of the Rednitz •
Schwarzbach, tributary of the Günz •
Schwarzbach, tributary of the Laufach •
Schwarzbach, tributary of the Reschbach •
Schwarzbach, tributary of the Saalach •
Schwarze Laber •
Schwarzenbach, tributary of the Obere Argen •
Schwarzenbach, tributary of the Weißach •
Schwarzlofer •
Schwebelbach •
Schweinnaab •
Schwesnitz •
Schörgenbach •
Schützbach •
Seebach, tributary of the Isar •
Seebach, headwater of the Laufach •
Seebach, tributary of the Rhine–Main–Danube Canal •
Seetraun •
Seibertsbach •
Selbbach •
Selbitz •
Sempt •
Siebenbrunner Bächl •
Siechenbach •
Silberbach •
Sims •
Sindersbach •
Singold •
Sinn •
Sittenbach •
Söllbach •
Sommerkahl •
Speckkahl •
Starzlach, tributary of the Breitach •
Starzlach, tributary of the Ostrach •
Starzlach, tributary of the Wertach •
Steinach •
Steinbach, tributary of the Hafenlohr •
Steinbach, tributary of the Kahl •
Steinbach, tributary of the Main •
Steinbach, tributary of the Paar •
Steinbach, tributary of the Reichenbach •
Steinbach, tributary of the Saalach •
Sterzenbach •
Stickelgraben •
Stillach •
Stoißer Ache •
Störzelbach •
Streitmühlbach •
Streu, tributary of the Franconian Saale •
Streu, tributary of the Kahl •
Strogen •
Southern Regnitz •
Sulz •
Sulzach •
Sulzbach, tributary of the Main •
Sulzbach, tributary of the Rott •
Sur •
Swabian Rezat ==T==