On 14 July 1681, he resigned his chaplaincy, returning through
Italy and
France, and settling once more at Merton College. He took the degrees of B.D. and D.D. (15 June 1683).
Humphry Prideaux, himself eager for the Hebrew professorship, mentions Huntington as a probable competitor. Through the recommendation of Fell to Marsh he was offered the
provostship of
Trinity College Dublin (1683) and accepted it. An Irish translation of the New Testament had already been printed, but Marsh and Huntington superintended a translation into the same language of the canonical books of the Old Testament, which was printed at the expense of
Robert Boyle. In 1688, he fled from Ireland but returned for a short time after the
battle of the Boyne. During this time
Michael Moore was appointed as head of the college. The
bishopric of Kilmore, which was vacant through the refusal of William Sheridan to take the
oaths of allegiance to the new ministry, was offered to him early in 1692 but declined, and as he preferred to live in England, he resigned his provostship of Trinity College (September 1692). In the same autumn (19 August 1692) Huntington was instituted, on the presentation of Sir Edward Turner, to the rectory of
Great Hallingbury in
Essex. He failed in October 1693 to obtain the wardenship of Merton College, and about the end of 1692, he married a daughter of John Powell and a sister of
Sir John Powell. He was consecrated
bishop of Raphoe on 20 July 1701 at Dublin. Almost immediately afterward he fell ill, and he died in
Dublin on 2 September 1701, when he was buried near the door of Trinity College Chapel, and a marble monument was erected by the widow to his memory. ==Works and legacy==