SAM cycle -like methyl transfer reaction. Only the SAM cofactor and cytosine base are shown for simplicity. The reactions that produce, consume, and regenerate SAM are called the SAM cycle. In the first step of this cycle, the SAM-dependent
methylases (EC 2.1.1) that use SAM as a substrate produce
S-adenosyl homocysteine as a product.
S-Adenosyl homocysteine is a strong negative regulator of nearly all SAM-dependent methylases despite their biological diversity. The
S-adenosyl homocysteine is hydrolysed to
homocysteine and
adenosine by
S-adenosylhomocysteine hydrolase and the homocysteine recycled back to
methionine through transfer of a methyl group from
5-methyltetrahydrofolate, by one of the two classes of
methionine synthases (i.e.
cobalamin-dependent or cobalamin-independent). This methionine can then be converted back to SAM, completing the cycle. In the rate-limiting step of the SAM cycle, MTHFR (methylenetetrahydrofolate reductase) irreversibly reduces 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate.
Radical SAM enzymes A large number of enzymes cleave SAM reductively to produce radicals:
5′-deoxyadenosyl 5′-radical, methyl radical, and others. These enzymes are called
radical SAMs. They all feature
iron-sulfur cluster at their active sites. Most enzymes with this capability share a region of sequence homology that includes the motif CxxxCxxC or a close variant. This sequence provides three cysteinyl thiolate ligands that bind to three of the four metals in the 4Fe-4S cluster. The fourth Fe binds the SAM. The radical intermediates generated by these enzymes perform a wide variety of unusual chemical reactions. Examples of radical SAM enzymes include
spore photoproduct lyase, activates of
pyruvate formate lyase and anaerobic sulfatases,
lysine 2,3-aminomutase, and various enzymes of cofactor biosynthesis, peptide modification,
metalloprotein cluster formation,
tRNA modification, lipid metabolism, etc. Some radical SAM enzymes use a second SAM as a methyl donor. Radical SAM enzymes are much more abundant in anaerobic bacteria than in aerobic organisms. They can be found in all domains of life and are largely unexplored. A recent bioinformatics study concluded that this family of enzymes includes at least 114,000 sequences including 65 unique reactions. Deficiencies in radical SAM enzymes have been associated with a variety of diseases including
congenital heart disease,
amyotrophic lateral sclerosis, and increased viral susceptibility.
S-Adenosylmethioninamine then donates its
n-propylamine group in the biosynthesis of polyamines such as
spermidine and
spermine from
putrescine. SAM is required for cellular growth and repair. It is also involved in the biosynthesis of several hormones and neurotransmitters that affect mood, such as
epinephrine.
Methyltransferases are also responsible for the addition of methyl groups to the 2′ hydroxyls of the first and second
nucleotides next to the 5′ cap in
messenger RNA. == Therapeutic uses ==