The original San Miguel church was probably built shortly after the founding of Santa Fe in 1610 and was the first church in the new settlement. It was built across the
Santa Fe River from the
villa proper in an area referred to as the Barrio de Analco, which was inhabited mainly by native people including some
Tlaxcalans who had accompanied the Spanish settlers from Mexico. Since missionary work was a priority for the Spaniards, they built a church to serve this population before building their own
Parroquia or parish church near the Plaza. In 1630,
Alonso de Benavides reported, The San Miguel Chapel was first mentioned in writing in 1628, indicating it was in use at that point. The original San Miguel Chapel was probably smaller than the present structure, with a rectangular
apse, a slightly raised
sanctuary, and a simple front elevation with no towers. The surviving foundations were excavated and studied by Bruce Ellis and Stanley Stubbs in 1955. In 1640, escalating conflict between Governor
Luis de Rosas and the
Franciscan missionaries who ran the church in New Mexico led to all of the Franciscans being expelled from Santa Fe, and the mission was partially or completely dismantled. De Rosas was later jailed and the Franciscans were able to return and rebuild the mission. It was damaged again in the
Pueblo Revolt of 1680, when the
Pueblo people rose up in a coordinated rebellion to drive the Spanish from New Mexico. When
Diego de Vargas led the Spanish back into Santa Fe in 1692, he found the mission burned but reparable. According to his official report, dated December 18, 1693, A more thorough rebuilding was undertaken in 1710 under the direction of Don Agustín Flores Vergara, who is named on the main beam supporting the
choir loft along with the governor at the time, the
Marquis de la Peñuela. The church was probably rebuilt on the same foundations and had the same layout as the earlier building, except that the apse was apparently changed from rectangular to trapezoidal. San Miguel was visited in 1776 by
Fray Atanasio Domínguez, who wrote a thorough description: At some point after Domínguez' visit, possibly in the 1830s, the present
bell tower was added to the front of the church. By the time of the American occupation in 1846, masses were being held in the church only twice a year. The top levels of the tower collapsed during a storm in 1872 and by the 1880s the entire structure was in poor condition. In 1881, the
Archdiocese of Santa Fe sold the little-used building to the Christian Brothers who operated the adjacent
St. Michael's College. Under their ownership, the church was restored in 1887, rebuilding the bell tower and stabilizing the walls with stone
buttresses. This project gave the building a more European appearance, adding arched openings and a pitched metal roof to the front elevation. These elements were later removed in 1955 during the most recent remodeling of the church. ==Architecture==