The park is located on the divide between the
watersheds of the Great Lakes and the Gulf of Mexico, both of which drain to the Atlantic Ocean. The area is a low-relief plain which was once a
glacial lakebed. During the last phase of the
Wisconsinan glaciation, the deteriorating continental glacier left behind connected lakes, known as
Glacial Lakes Aitkin and
Upham. Formed by the retreat of the Saint Louis Sublobe of the Superior Lobe of the glacier, Lake Upham drained through Lake Aitkin to the Mississippi River through
Big Sandy Lake. The retreating glacier and the lakes deposited sand and sediments in the lakebed. As the lakes drained these sediments became the present plain. The plain at first was drained by the
Cloquet River, which then ran west to the Mississippi River. By the process of
stream piracy, the smaller Saint Louis River, which runs to Lake Superior, captured the Cloquet River and most of its drainage basin. This left behind the
East Savanna River which drains into the Saint Louis River, Lake Superior, the lower Great Lakes, and the Saint Lawrence River, and to the west, the
West Savanna River, which is tributary to the Mississippi River via the
Prairie River and
Big Sandy Lake. These wet lowlands adjoin rolling hills which are end moraines of the recent glaciation. The moraines are part of the Saint Louis Moraines Subdivision of the Northern Minnesota Drift Plain. ==Savanna Portage==