There are several chemical processes that happen abiotically (chemical reactions), as well as biotically (microbial or enzyme mediated reactions). For example, oxidation-reduction (
redox) reactions can occur simply through the reactions of elements, or by oxidizing/reducing bacteria. The transformations and turnover of elements between sediments and water occur through abiotic chemical processes and microbiological chemical processes. Sedimentation is often the final scavenging process that takes trace chemicals and elements out of the water column. While diffusion is the primary mode through which chemicals interact with the sediments, there are a number of physical mixing processes which facilitate this process (see Physical Processes section). Chemical fluxes are dependent on several gradients such as, pH and chemical potential. Based on a specific chemical's partitioning parameters, the chemical may stay suspended in the water column, partition to biota, partition to suspended solids, or partition into the sediment. In addition, Fick's first law of diffusion states that the rate of diffusion is a function of distance; as time goes on, the concentration profile becomes linear. While bacteria are present at the interface throughout the lake basin, their distributions and function vary with substrate, vegetation, and sunlight. For example, the bacterial population at the sediment-water interface in a vegetative
littoral zone tends to be larger than the population of the deeper
profundal zone, due to higher organic matter content in the former. And, a functional artifact of heavy vegetation at the interface might be a greater number of
Azotobacter, a genus of bacteria that can fix N2 to ionic ammonium (NH4+). Even though basin morphometry plays a role in the partitioning of bacteria within the lake, bacterial populations and functions are primarily driven by the availability of specific oxidants/electron acceptors (
e.g., O2, NO3−, SO4−, CO2). These constituents, diffused from the overlying water or the underlying sediment, can be used and/or formed during bacterial metabolism by different organisms or be released back into the water column. The steep redox gradients present at/within the sediment-water interface allow for a variety of aerobic and anaerobic organisms to survive and a variety of redox transformations to take place. Here are just a few of the microbial-mediated redox reactions that can take place within the sediment water interface. •
Aerobic respiration •
Nitrogen fixation •
Denitrification [anammox] • Manganese reduction • Iron reduction • Sulfate reduction •
Methanogenesis == See also ==