Dr C Radhakrishnan, the forensic surgeon and former Principal of Kottayam Medical College, who conducted the post-mortem on the body of the deceased Abhaya, had given the report as death by drowning. He later made a statement before the Magistrate on 1 January 2009. The crime branch did not allow him to visit the crime scene to form a definite opinion as to the cause of death. The explanation of the crime branch is that the case had been handed over to the state forensic chief Dr.B.Umadathan. Dr. Radhakrishnan noted six homicidal injuries on the body of the deceased. Sr. Abhaya had the following ante-mortem injuries as per the post-mortem certificate issued by Dr. Radhakrishnan: 1. Lacerated wound 1.8x0.5x0.2 cm., oblique, on the right side of the back of head, the upper end being 3 cm above end 3 cm behind the top of ear. 2. Lacerated wound 1.5x0.5x0.3 cm, oblique, on the head 2.5 cm behind injury No.1. 3. Graze abrasion 4 x 3 cm., oblique on the right side of the back of trunk, 9 cm below the lower end of shoulder blade with an upward and inward direction. 4. Abrasion 1.5x1 cm., 2 cm below injury No.3. 5. Multiple graze abrasions over an area 12 x 6 cm on the outer aspect of right buttock, the upper border being 4 cm below iliac crest. The direction of the grazes were upwards and inwards. 6. On dissection the scalp tissues over an area 2 x2 cm on middle of the top of head were found contused. The scalp tissues over an area 7 x 5 cm around injuries Nos.1 and 2 were also found contused. The skull was intact.
Brain showed localised sub-arachnoid haemorrhage underneath these contused regions. No sign of increased intra-cranial tension.
" CBI's dummy test On 7 April 1995, using a full-sized dummy of Sister Abhaya, the CBI made some experimental tests in the well where her corpse was found. Based on the post mortem report, On 17 April 1995 Dr. S.K. Pathak, the chief of the Forensic Department of
Sawai Man Singh Medical college,
Jaipur and Dr. Mahesh Varma, former chairperson of Anatomy Section submitted their formal
expert report to the CBI investigation team to the effect that homicide could not be ruled out. Subsequently, the CBI declared that the killers would soon be arrested.
Protests After the dummy test, no arrests were made. The Action Council staged a protest in front of the CBI office at
Cochin on 27 November 1995. Later, on 18 March 1996, another big rally was organised under the leadership of former chief minister of the state,
E.K. Nayanar, in front of the state secretariat at
Thiruvananthapuram, the state capital. Again, on 1 July 1996, the Action Council filed a petition in the High Court challenging the inaction of the CBI. On 20 August 1996, the High Court directed the CBI to complete its investigation in three months. In the meantime, the CBI advertised an award of to anyone who could give dependable evidence in the case. On 12 October 1996, all the
MPs from Kerala visited the
Prime Minister and pleaded with him to expedite the CBI investigation. However, on 6 December 1996 the CBI filed a petition in the Chief Judicial Magistrate's court
Ernakulam seeking to wind up its investigation in the matter for lack of evidence. The court rejected the request and directed the CBI to continue the investigation.
Court criticizing CBI The Chief Judicial
Magistrate (CJM) directed the CBI in its order dated 20 March 1997 to re-investigate the case. The court in its order strongly criticized the CBI for its loyalty and complicity to certain vested interests to defeat the ends of justice and the court observed that the CBI had not made party some very significant persons who otherwise emerged in the facts of the case quite evidently. The court also asserted its belief that the case could have easily been established had there been an honest and proper investigation. Further the court after seeing the video cassette of an Asianet interview, mentioned K.T. Michael by name for "influencing" the course of the investigation. This remark was later expunged by the High Court, after considering the reasons for the statements made during the interview. The CJM court observed that certain "invisible hands" were still trying to scuttle the Sister Abhaya murder case observing that these forces were trying to influence the investigating agencies and the government officials.
High Court's new intervention The Action Council, again on 30 May 1997 filed a
Public Interest Litigation in the High Court of Kerala against the non-compliance of the CJM's directive for re-investigation. The High Court in its order directed the CBI to report back to the court the progress it had made in the investigation in ten days from the date of the order. Having had enough of the failure and lack of interest on the part of the CBI, the High Court directed
suo moto the Director of the CBI to appoint a special team from New Delhi to investigate the matter. Thus P.D. Meena, the Superintendent of the CBI from New Delhi and his team undertook a month-long investigation and reported to the High Court. The CBI was convinced that the death of Abhaya was in fact murder. However, the CBI report said that due to lack of evidence it was not possible to go further into the matter. The High Court again on 28 September 1998 directed the CBI to file its final report of the re-investigation on or before 12 October 1998. The magistrate court later affirmed that there was clear evidence to show that some officers who took part in the investigation conducted by the local police and Crime Branch wanted to refer this case as a case of suicide. The remarks were later expunged by the High Court.
Developments since 2007 A report by B. Sreejan, senior reporter with the
Thiruvananthapuram bureau of
The New Indian Express (12 April 2007), stated that the original chemical examination report of the
vaginal swab and vaginal smear of sister Sephy has been found to have been tampered with. The manuscript of the workbook report from the Chemical Examination Laboratory shows over-writing in four places. Using a whitener and a different ink, the word
not has been added to the word
detected. The lab explained that it was quite normal to make corrections in the manuscript. Even Varghese P Thomas, the first investigating officer, said the post mortem and lab reports had ruled out rape, leaving no scope for suspicions on the veracity of the report.
Narco analysis tests As part of its investigation in August 2007, the CBI conducted
Narcosynthesis tests on Fr.
Thomas Kottoor, Fr.
Jose Poothrikkayil, Sr. Sephy and some others who they believed had knowledge about the case. Narco Analysis test report and CD were sent to the Chief Judicial Magistrate Court and to the High Court. There were allegations that the CDs relating to the narco analysis tests were manipulated. Justice Ramkumar of the Kerala High Court sent questionnaires to Dr. Malini, assistant director of the Bangalore centre where the narco analysis was conducted. The lab denied any manipulation. But Justice Hema, who heard the bail petition of the accused, based on Case Diaries, mentioned that the narco analysis CDs might have been manipulated and wanted the originals to be produced in court. Dr. Malini has since been dismissed from service on the charge of forging her birth certificates. CDAC Trivandrum, ordered by the Ernakulam CJM court to verify the Narco CDS submits that they are not equipped for the tests. CDs given to CDIT for tests. CDIT submits the finding that the CDs have been doctored more than 30 times. Court orders CBI to find out the original CDs. within 10 days. CBI questions the forensic lab officials including Dr. Malini. CBI makes a volte face and submits that the CDs were not edited. CDIT challenges the submission by CBI. Abhaya's father files contempt of court petition against CBI for not producing original CDs.
2008 On 11 January 2008, the Kerala High Court directed the CBI to produce the result of the Narco-analysis test conducted on the suspects in the case in a sealed cover before the court within two weeks. The court further directed that no third person had any right of disclosure of the content of the results till the appropriate stage, other than the High Court. In this regard, the CBI submitted it before the court on 21 January 2008. The results were submitted in a sealed cover as directed by the court.
Allegations regarding community leaders trying to sabotage the case There was speculation that an influential Christian political leader from Central Kerala tried to sabotage the case by influencing the then Congress government in the centre. Other allegations included the Catholic Church Council trying to influence the outcome of the investigations. Others also alleged that due to the constant pressure that the action council and their convener and his secret financial backers that a lot of real good leads were never followed up on or investigated.
Arrests CBI arrested two Catholic priests, Thomas Kottur (spelled Kottoor in another publication) and Jose Puthurukkayil, and a sister, Sister Sephy, on 19 November 2008. On 22 November 2008 Archbishop
Kuriakose Kunnacherry, former head of the Archdiocese of Kottayam, was summoned for questioning. The CBI questioned Kottayam Archbishop
Mathew Moolekkatt at its office in
Kochi on 24 November 2008. On 25 November 2008 V.V. Augustine, the Assistant Sub Inspector who prepared the
First Information Report during the initial case investigation, was found dead. Police said he committed suicide by cutting the artery on his wrist and taking poison. A suicide note cited mental torture by the CBI. The CBI had alleged that Augustine had destroyed evidence and closed the case as a suicide, but the case diary revealed it was Augustine who pointed to the possibility of homicide. He had recorded that Abhaya could have seen something objectionable in the dining room and could have been silenced. In his personal diary, Augustine wrote about how he was pressured by CBI to say that senior police officers tried to influence him. On 02 and 29 29 December 2008, the CBI made a statement before P. D. Soman, Chief Judicial Magistrate Ernakulam. According to the CBI, their brain-mapping and narco analysis investigations revealed that Abhaya woke up on 27 March 1992, early in the morning, descended the staircase and went to the hostel kitchen to get a drink of water from the refrigerator. Sephy hit Abhaya with an
axe ('kodali') thrice on the back of the head. She then collapsed. Thinking that Abhaya was dead, Kottoor and Poothrikkayil, assisted by Sephy, lifted Abhaya's body, took it out of the kitchen and dumped it in a well behind the building.
2009 On 1 January 2009,
Kerala High Court Justice K. Hema granted conditional bail to Catholic priests Thomas Kootoor and Jose Puthrukakyil and Sister Sephy. The CBI had pleaded with the Chief Justice that the bail application should be moved out of Hema's court as she was "prejudiced towards the case." Counsel responded that the arguments had been accepted by the earlier courts. Based on the case diary, Hema found that the CBI investigation was "only a chase for the shadow rather the object in this case. This chase is only a futile exercise. Investigation means to carefully examine the facts of a situation, an event, a crime, etc., to find out the truth about it or how it happened. It is not to fix the target first, without any evidence and then make a hunt for evidence." Hema also criticised the media and the public, which pronounced the verdict knowing very little about the facts of the case, including the 24 volumes of case diary, the medical reports and the statements from the doctors. Hema also mentioned the accusations propagated by the media, public and the CBI against officers of the local police and crime branch without any incriminating evidence. Hema refuted the argument that ASI Augustine tried to suppress facts. The case diary indicates that it was Augustine, who was in charge of the case for only two days, recorded the possibility of murder. Hema also made observations on the reliability of the narco analysis CDs and ordered production of the original CDs. On 18 December 2008,
Kerala Kaumudi wrote an editorial criticizing Hema's conduct during the bail hearing. A Division Bench of the High Court initiated criminal
contempt of court proceedings against the newspaper on the basis of the editorial. Subsequently, Kerala High Court dropped the proceedings against Kerala Kaumudi, noting there was no instance of any violation/contempt of court in whatsoever manner.
CBI filed chargesheet On 17 July 2009, the CBI DySP Nandakumar Nair filed a chargesheet in the Court of Chief Judicial Magistrate Ernakulam, charging Fathers Kottoor and Poothrikkayil and Sister Sephy with murder, destruction of evidence, and defamation.
Alleged confession In September 2009, the tapes, which were claimed to be recordings of the narco tests conducted by CBI agents on the three accused were leaked to
Kairali TV, a local television station. These revealed the alleged confessions of Father Jose Poothrikkayil, Father Thomas M. Kottur and Sister Sephy, who were all in the state of sedation. The videos, which have been uploaded to YouTube, showed the suspects detailing what happened during the night of the murder after having been injected with the truth serum. It was not clear whether the tapes were authentic or if it were accepted as evidence by the court.
2018 developments In January 2018, reports indicated that former superintendent of the police, K.T. Michael, was included in the list of the accused in the case based on an order of a special CBI court. Michael, who was part of the preliminary police investigation, was charged for allegedly destroying evidence such as the victim's robe and diary. The discharge petitions of the other two were rejected. == Trial Court verdict ==