Wilson Avenue opened on July 14, 1928, as part of an extension of the Canarsie Line. This extension, done as part of the
Dual Contracts, connected
Montrose Avenue, which had opened four years earlier, to
Broadway Junction, which was the western end of the already-operating elevated line to
Canarsie. The station opened next to the Most Holy Trinity Cemetery, making the eastbound platform overlook the pre-existing cemetery. On September 21, 1984,
Irma Lozada, a
New York City Transit Police officer, was murdered at an abandoned lot south of the station. Lozada was part of the Plain Clothes Anti-Crime unit when she was gunned down by Darryl Jeter, a chain snatcher that took her service gun as she attempted to arrest him for stealing a necklace from a rider. Lozada was the first female police officer to be
killed in action in New York City. In the 2010s, a ramp was built from the Wilson Avenue entrance to the ground-level Manhattan-bound platform for $3–5 million, making it accessible under the
Americans with Disabilities Act of 1990 (ADA). At the time, the elevated Canarsie-bound platform was not proposed to get ADA access since it would be much more costly to add an elevator up to the Canarsie-bound level. As part of its 2025–2029 Capital Program, the MTA has proposed making the station wheelchair-accessible for the southbound platform as well, in compliance with the ADA. Plans for the
Interborough Express, a
light rail line using the
Bay Ridge Branch right of way, were announced in 2023. As part of the project, a light rail station at Wilson Avenue has been proposed next to the existing subway station. ==Station layout==