Chemical properties Carnitine is a
zwitterion, meaning it has both positive and negative charges in its structure. In an aqueous solution, L-carnitine is freely soluble and its ionizable groups, COO− and N+(CH3)3, are over 90%
dissociated at physiological pH (~7.4) for humans.
Biosynthesis and metabolism Physiological effects in humans As an example of normal biosynthesis of carnitine in humans, a person would produce 11–34 mg of carnitine per day.) into -carnitine, requiring iron in the form of
Fe2+.
Fatty acid transport Carnitine is involved in transporting fatty acids across the mitochondrial membrane, by forming a long chain acylcarnitine ester and being transported by
carnitine palmitoyltransferase I and
carnitine palmitoyltransferase II.
Acetyl-CoA stabilization Carnitine plays a role in stabilizing
acetyl-CoA and
coenzyme A levels through the ability to receive or give an acetyl group. The first reaction of the carnitine shuttle is a two-step process catalyzed by a family of
isozymes of
acyl-CoA synthetase that are found in the outer mitochondrial membrane
, where they promote the activation of fatty acids by forming a
thioester bond between the fatty acid carboxyl group and the thiol group of coenzyme A to yield a fatty acyl–CoA. In the first step of the reaction, acyl-CoA synthetase catalyzes the transfer of
adenosine monophosphate group (AMP) from an ATP molecule onto the fatty acid generating a fatty acyl–adenylate intermediate and a pyrophosphate group (PPi). The
pyrophosphate, formed from the hydrolysis of the two high-energy bonds in ATP, is immediately hydrolyzed to two molecules of Pi by inorganic pyrophosphatase. This reaction is highly exergonic which drives the activation reaction forward and makes it more favorable. In the second step, the
thiol group of a cytosolic
coenzyme A attacks the acyl-adenylate, displacing AMP to form thioester fatty acyl-CoA. In the second reaction, acyl-CoA is transiently attached to the hydroxyl group of carnitine to form fatty acylcarnitine. This transesterification is catalyzed by an enzyme found in the outer membrane of the mitochondria known as carnitine acyltransferase 1 (also called carnitine palmitoyltransferase 1, CPT1). The fatty acylcarnitine ester formed then diffuses across the intermembrane space and enters the matrix by
facilitated diffusion through
carnitine-acylcarnitine translocase (CACT) located on the inner mitochondrial membrane. This
antiporter returns one molecule of carnitine from the matrix to the
intermembrane space for every one molecule of fatty acyl–carnitine that moves into the matrix. In the third and final reaction of the carnitine shuttle, the fatty acyl group is transferred from fatty acyl-carnitine to coenzyme A, regenerating fatty acyl–CoA and a free carnitine molecule. This reaction takes place in the mitochondrial matrix and is catalyzed by carnitine acyltransferase 2 (also called carnitine palmitoyltransferase 2, CPT2), which is located on the inner face of the inner mitochondrial membrane. The carnitine molecule formed is then shuttled back into the intermembrane space by the same cotransporter (CACT) while the fatty acyl-CoA enters
β-oxidation.
Regulation of fatty acid β oxidation Balance The carnitine-mediated entry process is a rate-limiting factor for fatty acid oxidation and is an important point of regulation.
Inhibition The liver starts actively making
triglycerides from excess glucose when it is supplied with glucose that cannot be oxidized or stored as glycogen. This increases the concentration of
malonyl-CoA, the first intermediate in fatty acid synthesis, leading to the inhibition of carnitine acyltransferase 1, thereby preventing fatty acid entry into the mitochondrial matrix for
β oxidation. This inhibition prevents fatty acid breakdown while synthesis occurs.
Activation Carnitine shuttle activation occurs due to a need for fatty acid oxidation which is required for energy production. During vigorous muscle contraction or during fasting, ATP concentration decreases and AMP concentration increases leading to the activation of
AMP-activated protein kinase (AMPK). AMPK
phosphorylates acetyl-CoA carboxylase, which normally catalyzes malonyl-CoA synthesis. This phosphorylation inhibits acetyl-CoA carboxylase, which in turn lowers the concentration of malonyl-CoA. Lower levels of malonyl-CoA disinhibit carnitine acyltransferase 1, allowing fatty acid import to the mitochondria, ultimately replenishing the supply of
ATP.
Transcription factors Peroxisome proliferator-activated receptor alpha (PPAR
α) is a nuclear receptor that functions as a
transcription factor. It acts in muscle, adipose tissue, and liver to turn on a set of genes essential for fatty acid oxidation, including the fatty acid transporters carnitine acyltransferases 1 and 2, the fatty acyl–CoA dehydrogenases for short, medium, long, and very long acyl chains, and related enzymes. PPAR
α functions as a transcription factor in two cases; as mentioned before when there is an increased demand for energy from fat catabolism, such as during a fast between meals or long-term starvation. Besides that, the transition from fetal to neonatal metabolism in the heart. In the fetus, fuel sources in the heart muscle are glucose and lactate, but in the neonatal heart, fatty acids are the main fuel that require the PPAR
α to be activated so it is able in turn to activate the genes essential for
fatty acid metabolism in this stage.
Metabolic defects of fatty acid oxidation More than 20 human genetic defects in
fatty acid transport or
oxidation have been identified. In case of
fatty acid oxidation defects, acyl-carnitines accumulate in mitochondria and are transferred into the cytosol, and then into the blood. Plasma levels of acylcarnitine in newborn infants can be detected in a small blood sample by
tandem mass spectrometry. When
β oxidation is defective because of either
mutation or deficiency in carnitine, the ω (omega) oxidation of fatty acids becomes more important in mammals. The ω oxidation of fatty acids is another pathway for F-A degradation in some species of vertebrates and mammals that occurs in the endoplasmic reticulum of the liver and kidney, it is the oxidation of the ω carbon—the carbon farthest from the carboxyl group (in contrast to \beta oxidation which occurs at the carboxyl end of
fatty acid, in the mitochondria). ==Deficiency==