Some coactivators indirectly regulate gene expression by binding to an activator and inducing a
conformational change that then allows the activator to bind to the DNA enhancer or promoter sequence. Once the activator-coactivator complex binds to the enhancer, RNA polymerase II and other general transcription machinery are recruited to the DNA and transcription begins.
Histone acetyltransferase Nuclear DNA is normally wrapped tightly around histones, making it hard or impossible for the transcription machinery to access the DNA. This association is due primarily to the
electrostatic attraction between the DNA and histones as the DNA
phosphate backbone is negatively charged and histones are rich in lysine residues, which are positively charged. The tight DNA-histone association prevents the transcription of DNA into RNA. Many coactivators have histone acetyltransferase (HAT) activity meaning that they can acetylate specific
lysine residues on the N-terminal tails of histones. In this method, an activator binds to an enhancer site and recruits a HAT complex that then acetylates nucleosomal promoter-bound histones by neutralizing the positively charged lysine residues. Acetylation is crucial for synthesis, stability, function, regulation and localization of proteins and RNA transcripts. HAT mediated histone acetylation is reversed using histone deacetylase (HDAC), which catalyzes the hydrolysis of lysine residues, removing the acetyl group from the histones.
Corepression Many coactivators also function as
corepressors under certain circumstances. Cofactors such as
TAF1 and
BTAF1 can initiate transcription in the presence of an activator (act as a coactivator) and repress basal transcription in the absence of an activator (act as a corepressor). == Significance ==