The Emiquon National Wildlife Refuge and the Emiquon Project cover the historic beds of
Flag Lake and
Thompson Lake, which were shallow, alluvial
lakes created by the
Illinois River during the geological period that followed the last
ice age. Heavy loads of
sand and
silt carried southwest by the river created almost random, undulating topography along the river's bed. The river responded to these deposits by repeatedly shifting its course, leaving long, narrow sections of abandoned riverbed behind it. Two of these sections became Flag Lake and Thompson Lake. Surrounding these two lakes, and strung out along the western bank of the Illinois River, was a characteristic North American riverine
ecosystem characterized by dense populations of shellfish, fish, migratory birds, and mammals. The Emiquon wetland became a favorite home for many
Indians of the Illinois Territory for thousands of years, leaving 149 known archeological sites behind them within the parcels of land that make up the Project. These hunter-gatherers used and lived in and around both the wetlands of Emiquon and the adjacent river bluffs. During the centuries between 1000 CE and 1300 CE, many of them buried their dead in an adjacent blufftop, now the
Dickson Mounds National Historic Site. When new Americans of European ancestry began living along the Illinois River in the late 17th century, they brought several wetland diseases with them, notably
malaria. Local Indian populations declined, and the settlers tried not to live in or near wetlands, believing them to be unhealthy places to live. When Fulton County was organized in 1823, the settlers selected a blufftop location several miles away as the county seat. A population of local Illinois River settlers thinly settled the Emiquon riverbank, which was too wet for traditional European-style farming. The region continued to yield a living to
fur trappers,
hunters, and
fishermen. However, in 1919
Joy Morton, a wealthy Chicago
CEO, acquired the Emiquon area and had a levee built around it and drainage ditches dug. Emiquon became the
Norris Farm, and the former wetlands and lake beds were drained and converted into cornfields. The formerly free-flowing Illinois River was dammed and confined to a narrow channel running between artificial banks. Much of Emiquon was low-lying and required periodic pumping with electric motors so that the land could remain dry and useful as farmland. It was the largest agricultural farm in Illinois. ==Restoration project==