Encephalographa species are characterized by their distinctive fruiting bodies (
ascomata) that grow on rock surfaces. These ascomata are black, superficial (growing on the surface rather than embedded), and have a distinctive elongated shape resembling small lines or cracks (). A notable feature is how these fruiting bodies cluster together densely in compact groups, creating distinctive patterns on the . The ascomata have a structure with a (the spore-bearing surface) that is reduced to a narrow slit, rather than being openly exposed as in many other lichens. They possess a substantial protective outer layer () that is dark brown to black in colour, which forms both around the sides and beneath the fruiting body. Inside the ascomata,
Encephalographa contains a clear gel-like layer (
hymenium) that does not turn blue when
stained with
iodine (non-
amyloid), a feature used for identification purposes. The
hymenium contains a dense network of branched and interconnected filaments (
paraphyses) that support the reproductive structures. The reproductive cells (
asci) are club-shaped to somewhat cylindrical, containing eight
spores each. The asci have walls that are thickened at the top and contain a distinct chamber (ocular chamber). The spores themselves are
ellipsoid in shape, divided by a single
septum (1-septate), and can range from smooth to finely ornamented. When young, the spores are colourless (
hyaline), but they develop a brownish colour as they mature. The spores also feature a thin outer covering known as a . ==Species==