The club was formed 1964 under the name
Spartak. In 1969, the club was renamed to
Andijanez. After 1990, the club played in the
Uzbek League as
Navruz Andijan. Since 1997, the club has played as
FK Andijan. In 1964–70, 1973–74 and 1986–91 the club played in Soviet League championships. On 22 August 2012, the club hired
Azamat Abduraimov as head coach to help Andijan remain in the top division, however the club was relegated to the
Uzbekistan First League. The club finished as
2013 season runners-up after
Mash'al Mubarek and gained promotion to Uzbek Super League after a single year in the First League. After the first half of the 2013 season, Andijon was 14th in the league with only 4 points. On 14 June 2014 Andijan lost an away match against
Bunyodkor by 1–2. Some days later, on 20 June 2014
Azamat Abduraimov resigned. Orif Mamatkazin, as the interim of the club, was appointed as caretaker. On 26 September 2014
Edgar Gess was appointed as the club's new head coach. On 6 October 2024, Andijon won their first ever
Uzbekistan Cup, where
Vladimir Bubanja scored a 120th-minute winning goal against
Navbahor in the final in a 3–2 win. That was a very crucial win for the club as the club qualified to the
2025–26 AFC Champions League Two, which is first ever continental competition in club's history.
Club names • 1964–67: Spartak • 1969–74: Andijanez • 1983–85: Tekstilshhik • 1986–88: Pakhtakor • 1989–90: Spartak • 1991–96: Navruz • 1997–2005: FK Andijan • 2006–2007: Andijan UzDaewoo Auto • 2008–
present: FC Andijan ==History==