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Lanthanide-dependent methanol dehydrogenase

Lanthanide-dependent methanol dehydrogenase is an oxidoreductase enzyme involved in methane metabolic pathways in microbial metabolism. This enzyme was first isolated from the methylacidiphilum fumariolicum and others in the methylacidiphilum species. The enzyme requires La3+, Ce3+, Pr3+ or Nd3+. Higher lanthanides show decreasing activity with Sm3+, Eu3+ and Gd3+. The lanthanide atom in the enzyme is coordinated by pyrroloquinoline quinone. The enzyme catalyzes the following reaction:2 Fe(III)-cytochrome cL + methanol -> 2 Fe(II)-cytochrome cL + formaldehyde + 2 H+

Background
Methylotrophic bacteria are those that consume one-carbon and methylated compounds as the primary carbon source. These bacteria have been known for a century and are largely important in methane and methanol biogeochemical cycles. For the majority of the history of studies on these enzymes, pyrroloquinoline quinone (PQQ)-dependent methanol dehydrogenases were said to be the primary enzymes for the oxidation of methanol. The machinery of the PQQ-dependent enzyme is largely Conserved among the α, β, and γ-protebacteria. of the PQQ-dependent methanol deydrogenase. The discovery of lanthanide-dependent methanol dehydrogenases changed this belief, originally a seen as a homolog of MoxF. Several of these enzymes showed methanol dehydrogenase activity in the presence of lanthanide ions such as Ln3+. In the study of metaloenzymes, it was originally believed that Ln3+ was biologically unimportant, but the discovery of Ln3+-dependent AHDs revealed more about the biological activity of lanthanides. ==Structure==
Structure
In the homodimeric Ce3+-dependent methanol dehydrogenase sampled from methylacidiphilum fuimariolicum SolIV, the active site consists of glutamate, asparagine and aspartic acid residues that form a coordination complex for the Cerium ion. In protein crystallization studies, a molecule of polyethylene glycol occupies a substrate binding coordination position of Ce3+. The bacterial enzymes are known to interact with two cytochromes, cL and cH. Once methanol is oxidized, PQQ is reduced. The re-oxidation of PQQ is facilitated through the stepwise electron transfer to the cytochromes. ==Reaction==
Reaction
The reaction catalyzed by lanthanide-dependent methanol dehydrogenase is one that oxidizes methanol to form formaldehyde and hydrogen ions. The essential cofactors include a PQQ prosthetic group at the active site, in addition to essential cytochromes present for electron transfer. The enzyme acts at the site. MDHs in the methylobacterium species are typically shown to depend also on Ca2+ when grown on methanol. However, studies conducted with MDH on a methanol-substrate that were given only Ln3+ and not Ca3+ showed growth, indicating that MDHs (particularly Ln3+-dependent ones) can oxidize menthol and form formaldehyde even without calcium ions present. ==Notes==
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