The German lichenologist
Karl Friedrich Wilhelm Wallroth established the genus
Thrombium in 1831, giving it the
vernacular name "Pfropfflechte" ("graft-lichen"). In the protologue he grouped it with his "Pyrenocymatia" ( lichens) and defined the genus by minute, , black
fruiting bodies whose summit first forms a tiny and then opens by a pore that exudes a whitish, drop- or thread-like mass; once discharged, the fruit becomes shallow and wrinkled. He noted the
thallus as variable and often cottony with a
green alga. In the same work he introduced several species under the genus, including
T. punctiforme,
T. asserculorum,
T. bacillare,
T. glaciale,
T. graniferum (with several infraspecific
taxa),
T. incrustans,
T. insculptum,
T. nostoc,
T. sordidum,
T. spongiosum,
T. velutinum,
T. vermicelliferum, and
T. verrucosum; he also made
new combinations for previously named species such as
T. corniculatum,
T. graniforme,
T. stigmatellum, and
T. trachonum. In 2005, a two-gene
phylogeny sampling several pyrenocarpous families showed that fruiting body form is a poor guide to deep relationships: "Thrombiaceae" (
Thrombium) fell within the
Lecanoromycetes and formed a supported
clade with Protothelenellaceae. On combined
molecular and
ascus-morphology evidence the authors recommended sinking Thrombiaceae into Protothelenellaceae. They also documented a shared, ring-shaped
amyloid structure in the ascus apex of
Protothelenella and
Thrombium, contrasting it with the non-amyloid, evenly thickened asci of
Verrucariaceae,
Strigulaceae, and
Pyrenulaceae (placed in
Chaetothyriomycetes). The deeper placement of the Protothelenellaceae +
Thrombium lineage remained ambiguous between positions near
Ostropales (in the loose sense) and
Agyriales, depending on the substitution model used. Broader molecular treatments of Verrucariaceae resolved four principal lineages and showed that several long-used genera are not
monophyletic; traditional such as ascospore septation and the presence or absence of hymenial algae proved to be
homoplastic. In older classification schemes,
Thrombium was sometimes listed among verrucarioid genera of Verrucariaceae, indicative of a wider circumscription used at the time. A 2015 reappraisal of arthoniaceous lichens with white, powdery asexual structures resurrected and lectotypified the genus
Inoderma with
I. byssaceum, and showed—using morphology, chemistry, and multilocus phylogeny—that the pruinose, pycnidia-bearing taxa sit in Arthoniaceae (with the then-newly described
Sporodophoron and
Glomerulophoron covering related l lineages). Because
Inoderma is the earlier name, those species are not treated in
Thrombium. The name
Thrombium applies to the verrucarioid lineage centred on
T. epigaeum, which is now placed in
Protothelenellaceae, where
Thrombium is treated as one of three genera (with
Protothelenella and
Mycowinteria). ==Description==