A number of different methods demonstrate that the traditional
Trypanosoma genus is not monophyletic, with the biflagellate
Bodonida nested within. The American and African trypanosomes constitute distinct clades, implying that the major human disease agents
T. cruzi (cause of Chagas' disease) and
T. brucei (cause of African sleeping sickness) are not closely related to each other. Phylogenetic analyses suggest an ancient split between a branch containing all
Salivarian trypanosomes and a branch containing all non-Salivarian lineages. The latter branch in turn splits into a clade containing bird, reptilian and the
Stercorarian trypanosomes infecting mammals, and a clade with a branch of fish trypanosomes and a branch of reptilian or amphibian lineages. Salivarians are trypanosomes of the subgenera of
Duttonella,
Trypanozoon,
Pycnomonas and
Nannomonas, which are passed to the vertebrate recipient in the saliva of the tsetse fly (
Glossina spp.).
Antigenic variation is a characteristic shared by the Salivaria, which has been particularly well-studied in
T. brucei. The
Trypanozoon subgenus contains the species
Trypanosoma brucei,
T. rhodesiense and
T. equiperdum. The subgenus
Duttonella contains the species
T. vivax.
Nannomonas contains
T. congolense. Stercorians are trypanosomes passed to the recipient in the feces of insects from the subfamily
Triatominae (most importantly
Triatoma infestans). This group includes
Trypanosoma cruzi,
T. lewisi,
T. melophagium,
T. nabiasi,
T. rangeli,
T. theileri,
T. theodori. The subgenus
Herpetosoma contains the species
T. lewisi. The subgenus
Schizotrypanum contains
T. cruzi The relationships between the species have not been worked out to date. It has been suggested that
T. evansi arose from a clone of
T. equiperdum which lost its maxicircles. It has also been proposed that
T. evansi should be classified as a subspecies of
T. brucei. It has been shown that
T. equiperdum has emerged at least once in Eastern Africa and
T. evansi at two independent occasions in Western Africa. == Selected species ==