with
I-90 bridge in the background On the upper reaches near the Minnesota-
Wisconsin border, the river's
floodplain is between 1.5 and 5 kilometers (between 1 and 3 mi) wide. South of
St. Louis, Missouri, the alluvial floodplain is approximately 80 kilometers (50 mi) wide. Major
tributaries to the Upper Mississippi River include the
Missouri,
Illinois,
Minnesota,
St. Croix,
Chippewa,
Black,
Wisconsin, and
Kaskaskia Rivers. The Upper Mississippi provides habitat for more than 125 fish species and 30 species of freshwater mussels. Three national wildlife refuges along the river cover a total of 465 square kilometers (285,000 ac). The largest of them, the
Upper Mississippi River National Wildlife and Fish Refuge, is over 420 kilometers (260 mi) long, reaching from the
Alma, Wisconsin area down to
Rock Island, Illinois. The refuge consists of blufflands, marshes, bottomland forest, islands, channels, backwater lakes and sloughs. It is part of the
Mississippi Flyway. Although the river is much cleaner than it was in recent decades, water quality is still a priority concern. Agricultural runoff, including sediment, excessive nutrients, (particularly nitrogen and phosphorus), and chemicals from agricultural and industrial sources continue to threaten Upper Mississippi River aquatic resources. In addition new threats continue to emerge such as personal care items including pharmaceuticals and endocrine-disrupting chemicals. The five states bordering the Upper Mississippi River are working together to address water quality issues. The
Minnesota Pollution Control Agency planned to test the entire of the river within the state for the first time in 2024. There is general agreement that nutrients are contributing to the
Gulf of Mexico dead zone and to
eutrophication problems in
Lake Pepin, a large natural riverine lake that is part of Pool 4 of the Upper Mississippi River. National and regional efforts are addressing these problems, but nutrient impairment problems are occurring elsewhere in the Upper Mississippi River as well, particularly in off-channel portions. Excessive nutrients contribute to thick floating mats of filamentous
algae or
duckweeds that have a pronounced negative impact on light penetration and may threaten the growth and persistence of submerged aquatic vegetation that is important for fish and aquatic life, including waterfowl. Efforts to control nutrients from point and non-point sources in the basin have aimed to provide additional benefits. ==Navigation==