Lower Bay •
Ambrose Channel • Atlantic Highland Anchorage • Chapel Hill South Channel • Coney Island Channel • Gravesend Bay Anchorage • Raritan Bay East Reach • Rockaway Inlet • Sandy Hook Channel • Swash Channel • Terminal Channel
Raritan Bay • Red Bank Reach • Great Beds Reach • Raritan Bay West Reach • Raritan River Cutoff • Perth Amboy Anchorage • South Amboy Reach • Seguine Point Bend • Ward Point Bend (East & West) • Ward Point Secondary Channel
Jamaica Bay • Beach Channel • Island Channel • Runway Channel
Arthur Kill • Fresh Kills Reach • Elizabeth Port Reach • Gulfport Reach • Outerbridge Reach • Port Reading Reach • Port Socony Reach • Pralls Island Reach • South of Shooters Island Reach • Tremley Point Reach
Newark Bay • Elizabeth Channel • Newark Bay Middle Reach • Newark Bay North Reach • Newark Bay South Reach • North of Shooters Island Reach • Port Newark Branch Channel • Port Newark Pierhead Channel • South Elizabeth Channel
Kill van Kull • Bergen East Point Reach • Bergen West Point Reach • Constable Hook Reach
Upper Bay •
Anchorage Channel • Bayridge Channel •
Buttermilk Channel • Claremont Terminal Channel • Port Jersey Channel • Greenville Channel • Pierhead Channel • Red Hook Channel • Red Hook Flats Anchorage
Hudson River • Weehawken Edgewater Channel
East River • East Channel • South Brother Channel • West Channel ==Port facilities==