From the beginning of the First Civil War, the Long Parliament recognized that they would need assistance from the Scots. In return for a military alliance, the
Scottish Parliament required the English to sign the
Solemn League and Covenant in 1643, which stipulated that the English would bring their church into greater conformity with the Church of Scotland. The Scottish Parliament sent
commissioners to London to represent Scotland's interests to the English Parliament. Eleven of these, four theologians and seven members of Parliament, were also invited to the Assembly. The commissioners were given the opportunity to become full voting members of the Assembly but declined, preferring to maintain their independence as commissioners of their own nation and church.
Samuel Rutherford,
George Gillespie, and
Alexander Henderson were the most outspoken of the commissioners. was one of the most prominent of the Scottish commissioners. On 12 October 1643, Parliament ordered the Assembly to cease work on the Thirty-Nine Articles and to begin to frame a common form of church government for the two nations. The Assembly would spend a quarter of its full sessions on the subject of church government. The majority of the Assembly members supported presbyterian polity, or church government by elected assemblies of lay and clerical representatives, though many were not dogmatically committed to it. Several members of this group, numbering about twenty and including William Twisse, favoured a "primitive" episcopacy, which would include elements of presbyterianism and a reduced role for bishops. There were also several
congregationalists, who favoured autonomy for individual local churches. Their most influential divines were
Thomas Goodwin,
Philip Nye,
Sidrach Simpson,
Jeremiah Burroughs, and
William Bridge. They were often called the "dissenting brethren" in the Assembly. They have sometimes been labelled "Independents", but they rejected this term. The Assembly members for the most part reserved the label "Independent" for separatists who left the established church. The congregationalist divines cannot be equated with
separatists and
Brownists, as they had accepted episcopal ordination and remained in the Church of England. Their influence was assisted by the success of
Oliver Cromwell and his
New Model Army in the ongoing civil war. Cromwell and many others in the army supported congregationalism. A third group of divines were known as
Erastians, a term for those who believed that the state should have significant power over the church. The entire Assembly was Erastian in the sense that the body had been called by Parliament and was completely under state control. Those labelled "Erastian" at the Assembly believed the civil authority, rather than church officers, should hold the power of
church discipline. This included the power to withhold communion from unrepentant sinners. They did not see any particular form of church government as divinely mandated, and because of this the dissenting brethren allied with them when it became clear that a presbyterian establishment would be much less tolerant of congregationalism than Parliament. There were only two divines at the Assembly who held the Erastian view,
John Lightfoot and
Thomas Coleman, but the presence of members of Parliament, especially
John Selden, as well as the fact of parliamentary oversight of the Assembly, gave Erastian views disproportional influence. Several episcopalians, supporters of the existing system of bishops, were also included in the summoning ordinance, but Parliament may have nominated them to lend greater legitimacy to the Assembly and not have expected them to attend because Charles had not approved of the Assembly. Only one,
Daniel Featley, participated, and he only until his arrest for treason in October 1643. Debate on church officers began on 19 October. The Assembly began with the issue of ordination, as many of the divines were concerned about the rise of various sectarian movements and the lack of any mechanism for
ordination of ministers of the established church. While some members did not seem to think ordination necessary for preachers (though they should not administer the
sacraments without it), a majority of the divines thought any regular preaching without ordination unacceptable and wished to erect a provisional
presbytery for purposes of ordination. There was also debate at this early stage over the nature of the
visible church. The congregationalists considered a church to be a single local congregation, while the majority considered the national church to be a unity and were alarmed at the prospect of a disintegrated English church. Despite these debates, up until the end of 1643 there was hope that a common church government could be framed that would be satisfactory to all parties involved. was one of the dissenting brethren. On 3 or 4 January 1644, the five leading dissenting brethren signalled a break with the rest of the Assembly when they published
An Apologeticall Narration, a polemical pamphlet appealing to Parliament. It argued that the congregational system was more amenable to state control of religious matters than that of the presbyterians because they did not desire the church to retain any real power except to withdraw fellowship from aberrant congregations. By 17 January, the majority of the Assembly had become convinced that the best way forward was a presbyterian system similar to that of the Scots, but the dissenting brethren were allowed to continue to state their case in hope that they could eventually be reconciled. It was hoped that by avoiding asserting that presbyterianism was established by divine right, the congregationalists could be accommodated. Despite these efforts, on 21 February it became clear just how fundamentally opposed the groups were. Philip Nye, one of the dissenting brethren, asserted in a speech that a presbytery set over local congregations would become as powerful as the state and was dangerous to the commonwealth, provoking vigorous opposition from presbyterians. The next day, the Assembly finally began to establish a prescription for presbyterian government. Owing to a strong belief in the unity of the church, the Assembly continued to try to find ways to reconcile the dissenting brethren with the majority throughout 1644, including the establishment of a special committee for that purpose in March. However, on 15 November, the dissenting brethren presented their reasons for disagreement with the rest of the Assembly to Parliament, and on 11 December the majority submitted a draft of a presbyterian form of government. ==Conflicts with Parliament==