The following is a partial list of "housekeeping genes." For a more complete and updated list, see HRT Atlas database compiled by Bidossessi W. Hounkpe et al. •
POLR3C •
POLR3E •
POLR3GL •
POLR3K Protein processing •
PPID Peptidyl-prolyl cis-trans isomerase D •
PPIE Peptidyl-prolyl cis-trans isomerase E •
PPIF Peptidyl-prolyl cis-trans isomerase F •
PPIG Peptidyl-prolyl cis-trans isomerase G •
PPIH Cyclophilin H •
CANX •
ALDOA •
GSK3B •
TPI1 •
ANXA6 •
ANXA7 •
ARPC1A Actin-related peptide •
ARPC2 •
ARPC5L •
CAPZA2 •
CAPZB •
RHOA also implicated in regulation of cell cycle •
RHOB •
RHOT1 mitochondrial trafficking •
RHOT2 •
TUBB Tubulin, beta polypeptide •
WDR1 actin disassembly?
Organelle synthesis A specialized form of cell signaling •
BLOC1S1 •
BLOC1S2NM_173809 •
BLOC1S3NM_212550 •
BLOC1S4NM_018366 •
BLOC1S6NM_012388 •
AP1G1 NM_001128 •
AP1M1 NM_032493 •
AP2A1 NM_014203 •
AP2A2 NM_012305 •
AP2M1 •
AP2S1 NM_004069 •
AP3B1 NM_003664 •
AP3D1 NM_003938 •
AP3M1 NM_012095 •
AP3S1 NM_001284 •
AP3S2 NM_005829 •
AP4B1 NM_006594 •
AP5M1 NM_018229 •
ANXA6 Annexin 6 •
ANXA7 Annexin 7 •
AP1B1 Coated vesicles •
CLTA Clathrin A (vesicles) •
CLTB Clathrin B (vesicles) •
CLTC Mitochondrion •
MTX2 Surface •
AP2S1 •
CD81 •
GPAA1 •
LGALS9 •
MGAT2 •
MGAT4B •
VAMP3 Cell adhesion •
CTNNA1 NM_001903 •
CTNNB1 •
CTNNBIP1 NM_020248 •
CTNNBL1 NM_030877 •
CTNND1 NM_001085458 delta catenin
Channels and transporters •
ABCB10 NM_012089 •
ABCB7 NM_004299 •
ABCD3 NM_002857 •
ABCE1 NM_002939 •
ABCF1 NM_001090 •
ABCF2 NM_005692 •
ABCF3 NM_018358 •
CALM1 Calmodulin grasps calcium ions •
MFSD11 NM_024311 similar to MSFD10 aka TETRAN or tetracycline transporter-like protein •
MFSD12 NM_174983 •
MFSD3 NM_138431 •
MFSD5 NM_032889 •
SLC15A4 NM_145648 •
SLC20A1 NM_005415 •
SLC25A11 mitochondrial oxoglutarate/malate carrier •
SLC25A26 NM_173471 •
SLC25A28 NM_031212 •
SLC25A3 NM_002635 •
SLC25A32 NM_030780 •
SLC25A38 NM_017875 •
SLC25A39 NM_016016 •
SLC25A44 NM_014655 •
SLC25A46 NM_138773 •
SLC25A5 NM_001152 •
SLC27A4 NM_005094 •
SLC30A1 NM_021194 •
SLC30A5 NM_022902 •
SLC30A9 NM_006345 •
SLC35A2 NM_005660 •
SLC35A4 NM_080670 •
SLC35B1 NM_005827 •
SLC35B2 NM_178148 •
SLC35C2 NM_015945 •
SLC35E1 NM_024881 •
SLC35E3 NM_018656 •
SLC35F5 NM_025181 •
SLC38A2 NM_018976 •
SLC39A1 NM_014437 •
SLC39A3 NM_144564 •
SLC39A7 NM_006979 •
SLC41A3 NM_017836 •
SLC46A3 NM_181785 •
SLC48A1 NM_017842
Receptors •
ACVR1 NM_001105 similar to ACVRL1 TGF Beta receptor family
Rendu-Osler-Weber syndrome •
ACVR1B NM_004302 •
CD23 FCER2 low affinity IgE receptor (lectin)
HLA/immunoglobulin/cell recognition •
BAT1 aka DDX39B which is involved in RNA splicing •
BSG Basigin Immunoglobulin Superfamily, extracellular metalloproteinase • MIF
macrophage migration inhibitory factor •
TAPBP Kinases/signalling •
ADRBK1 can downregulate response to epinephrine •
AGPAT1 acyl 3 phosphoglycerol acyl transferase •
ARF1 •
ARF3 •
ARF4 •
ARF5 •
ARL2 RAS Superfamily •
CSF1 Colony stimulating factor
not highly expressed constitutively at 5-12 • CSK
C-src tyrosine kinase • DCT
dopachrome tautomerase •
EFNA3 •
FKBP1A •
GDI1 GDP Dissociation inhibitor (Rab family) •
GNAS1 ubiquitously expressed, but differentially imprinted •
GNAI2 •
HAX1 associated with tyrosine kinases •
ILK Integrin linked kinase •
MAPKAPK2 •
MAP2K2 •
MAP3K11 •
PITPNM Phosphatidylinositol transfer protein •
RAC1 Ro GTPase involved with many signaling pathways •
RAP1B GTPase involved with cell adhesion •
RAGA Ras-related GTP Binding •
STK19 •
STK24 Serine/Threonine Kinase •
STK25 •
YWHAB Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide •
YWHAH Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, h polypeptide •
YWHAQ Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide •
YWHAZ Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
Growth factors •
AIF1 •
HDGF Hepatoma derived growth factor
(translocates to nucleus) •
HGS •
LTBP4 •
VEGFB •
ZFP36L1 Tissue necrosis factor •
CD40 formerly TNFRSF5
Casein kinase •
CSNK1E •
CSNK2B Miscellaneous •
ALAS1 Aminolevulinic Acid Synthase type 1 (type 2 is erythroid and associated with porphyria) •
ARHGEF2 Rho guanine nucleotide exchange factor •
ARMET Mesencephalic astrocyte-derived neurotrophic factor •
AES amino terminal enhancer of split •
BECN1 involved in autophagy and partners with PI3K •
BUD31 formerly Maternal G10 transcript •
Creatine kinase CKB (ATP reservoir) •
Cytidine deaminase questionable: not present in very high levels at all •
CPNE1 •
ENSA (gene) •
FTH1 Heavy chain of Ferritin •
GDI2 rab/ras vesicular trafficking •
GUK1 Guanylate kinase transfers phosphate from ATP to GMP •
HPRT Hypoxanthine-guanine phosphoribosyltransferase •
IFITM1 Induced by interferon, transmembrane protein •
JTB (gene) Jumping translocation breakpoint •
MMPL2 •
NME2 (formerly NM23B) Nucleoside diphosphate kinase •
NONO •
P4HB •
PRDX1 peroxiredoxin (reduces peroxides) •
PTMA Prothymosin •
RPA2 Binds DNA during replication to keep it straightened out •
SULT1A3 Sulfate conjugation
(note: SULT1C is cited in earlier literature as being ubiquitous but this may be an example of different tags being used to refer to a common area of 2 closely related genes. If the tag is too short, then it may not be specific enough to truly specify one member of a gene family from another) •
SYNGR2 Synaptogyrin (may participate in vesicle translocation) •
Tetratricopeptide,
TTC1 small glutamine rich tetratricopeptide Open_reading_frame •
C11Orf13 •
C14orf2 •
GATD3 Sperm/Testis Although this page is devoted to genes that should be ubiquitously expressed, this section is for genes whose current name reflects their relative upregulation in testes •
SPAG7 •
SRM Spermidine synthase •
TEGT Bax-1 inhibitor •
DAZAP2 Deleted in azoospermia •
MEA1 Male enhanced antigen == See also ==