Reaches of Chillisquaque Creek are designated as an impaired waterbody. Causes of impairment include
sedimentation/
siltation and habitat alteration, while likely sources include
agriculture and industrial
point-source discharge. Many streams in the watershed experience significant impacts due to agriculture, as heavy use of agricultural lands reduces the creek's
water quality. A total of of streams, or about 83% of all the stream miles in the watershed, are impaired. The months with the highest average discharge are March, April, and December; their values are , , and , respectively. The
PPL power plant contributes about of water to the creek. In the 1970s, the concentration of
nitrate as
nitrogen in Chillisquaque Creek near Washingtonville ranged from 1.68 to 2.00 milligrams per liter, while the concentration of
nitrite as nitrogen ranged from 0.040 to 0.164 milligrams per liter. The concentration of
phosphorus ranged from 0.040 to 0.520 milligrams per liter. The organic carbon concentration was 3.0 milligrams per liter in one measurement. The concentration of
sulfate ranged from 32.0 to 114 milligrams per liter in the creek's filtered water and the
chloride concentration ranged between 8.0 and 14.0 milligrams per liter, again in filtered water. The
ammonia concentration ranged from 0.026 to 0.811 milligrams per liter. In the 1970s, the concentration of
magnesium in Chillisquaque Creek ranged from 1.50 to 9.50 milligrams per liter in the creek's filtered water and the
calcium concentration ranged from 26.4 to 48.8 milligrams per liter, in filtered water. The
arsenic concentration was once measured to be 77 micrograms per liter. The
cadmium, recoverable
chromium, and recoverable
copper concentrations were each once measured to be less than 3, less than 20, and 30 micrograms per liter, respectively. The recoverable
iron concentration ranged from 160 to 410 micrograms per liter. The concentrations of
zinc,
lead,
manganese, and
aluminum were less than 20, less than 50, 50, and 500 micrograms per liter, respectively. Additionally, a detectable amount of
nickel was observed in the creek. ==Geography, geology, and climate==