In general, protists have typical
eukaryotic cells that follow the same principles of
biology described for those cells within the "higher" eukaryotes (animals, fungi and land plants). However, many have evolved a variety of unique physiological adaptations that do not appear in the remaining eukaryotes, and in fact protists encompass almost all of the broad spectrum of
biological characteristics expected in eukaryotes. According to the nutrient source, they can be divided into
autotrophs (or
phototrophs, producers, traditionally
algae), which
photosynthesize their own
organic molecules, and
heterotrophs (consumers, traditionally
protozoa), which obtain organic molecules from the environment, either by passive feeding of small particles (i.e.,
osmotrophs) or by engulfing whole cells or parts of cells of other organisms (
phagotrophs).
Phagotrophy phagocytosing a Paramecium'' ciliate Phagotrophic protists feed by
phagocytosis, a process unique to eukaryotes where food particles or cells are digested into a
vacuole, the
phagosome. a tract supported by
microtubules. '' extracting algal cell content with a
pseudopodium (arrow) According to the method of digestion, protists can be divided into filter, raptorial, or diffusion feeders.
Filter feeders accumulate small
suspended particles into the cytostome by filtering them through pseudopodia or rigid tentacles, like
choanoflagellates, or by generating water currents around the cytostome, like
ciliates. nematodes, or tissues of larger animals. Probably all eukaryotes are capable of osmotrophy, but some have no alternative of acquiring nutrients. Obligate osmotrophs include the
aphagean euglenids, some
green algae, the human parasite
Blastocystis, some
metamonads, and the fungus-like
oomycetes and
hyphochytrids. as they combine photosynthesis with phagocytosis. While some mixotrophs already have chloroplasts (i.e., algae), others acquire chloroplasts by stealing them from their prey, a process known as
kleptoplasty. Kleptoplastic protists may be
generalists, able to steal chloroplasts from a variety of prey, like some ciliates, or they may be
specialists, only capable of obtaining chloroplasts from very specific prey. Specialists may keep the entire prey inside of their cells, as do many foraminifers and radiolarians, or they may only engulf the plastids and discard the rest. Among exclusively heterotrophic protists, variation of nutritional modes is also observed. The
diplonemids, which inhabit deep waters where photosynthesis is absent, can flexibly switch between osmotrophy and bacterivory depending on the environmental conditions.
Homeostasis s in
Paramecium aurelia Many
freshwater protists need to
osmoregulate (i.e., remove excess water volume to adjust the ion concentrations) because non-saline water enters in excess from the environment.
Mitochondria and respiration The
last eukaryotic common ancestor was
aerobic, bearing
mitochondria that synthesize
ATP through
oxidative respiration, which requires
oxygen. Most protists are aerobes, but many lineages of free-living and parasitic protists have independently adapted to inhabit
anaerobic or
microaerophilic (low-oxygen) habitats by modifying their mitochondria into organelles collectively known as
mitochondrion-related organelles (MROs). These exist in a continuum from lower to higher degrees of reduction. For example,
hydrogenosomes have lost the
electron transport chain used in respiration, as well as other features of classical mitochondria (
their DNA, the
Krebs cycle, etc.), but can still generate ATP anaerobically through the
fermentation of
pyruvate, releasing
hydrogen gas as a byproduct.
Mitosomes have lost both the respiratory chain and the production of ATP. One group of protists, the genus
Monocercomonoides, has lost its mitochondria entirely. In a similar manner, the oxidative
peroxisome evolved into a fermentative
glycosome in
trypanosomatids.
Mitochondrial genomes (mitogenomes), typically composed of one
circular chromosome, can appear as numerous linear chromosomes in many unrelated protists, such as
Amoebidium, with hundreds of chromosomes. The large mitogenome of
kinetoplastids is condensed into a
kinetoplast, which is physically tied to the flagellar apparatus. The smallest known mitogenome belongs to the symbiotic alga
Chromera velia.
Mitochondrial cristae, foldings of the
inner membrane, have been used to classify protists since the advent of electron microscopy.
Cytoskeleton The
cytoskeleton of protists generally consists of an array of
microtubules and other fibers that radiate from a complex
flagellar apparatus. This structure—sometimes known as the
mastigont—was present in the ancestor of all eukaryotes, and is fundamental to the structure, movement and division of cells. It is one of the only cellular features that can be compared across all protists, as it is relatively
conserved. The basic plan of the flagellar apparatus consists of two basal bodies (B1 and B2), one for each flagellum, followed by four primary microtubular 'roots' (named R1 through R4) and a 'singlet root' (SR) formed by a single microtubule and originating from B1. Attached to the R1 is a multilayered structure, also known as C fiber. Each protist group has modifications or secondary losses of this standard organization. In
archaeplastids, the SR and R2 supporting the feeding groove were lost, likely due to their shift to autotrophic nutrition. This connection is often done through different kinds of filamentous structures, variously called
rhizoplasts or internal flagellar roots.
Sensory perception with an ocelloid (double arrowhead)|alt=An image of a single cell featuring a large nucleus and an ocelloid, which is composed of a roundish "lens" and a darkly pigmented disc-shaped retinal body.|178x178px Many flagellates and probably all motile algae exhibit a positive
phototaxis (i.e. they swim or glide toward a source of light). For this purpose, they exhibit
photoreceptors of varying degrees of complexity, from simple receptors with light antennae (as in the
eyespot apparatus of many algae), to receptors with opaque screens, to complex
ocelloids with intracellular lenses (as in the dinoflagellate family
Warnowiaceae). Some
ciliates orient themselves in relation to the Earth's
gravitational field while moving (
geotaxis), and others swim in relation to the concentration of dissolved
oxygen in the water.—or their
nitrogen fixation. Others maintain only the chloroplasts of algae they ingest, and dispose of the remaining cellular structures (i.e.,
kleptoplasty). Several groups of protists host non-photosynthetic prokaryotes, often maintaining an anaerobic lifestyle through the metabolism of their symbionts.
Xenosomes are
bacterial endosymbionts with a
methanogenic role, found in anaerobic ciliates. Similarly,
breviates have hydrogen-oxidizing epibiotic bacteria. Metamonads, particularly
parabasalids and
oxymonads found in the hindgut of
termites, typically host methanogenic
archaea as epi- or endobionts. Some rare associations involve prokaryotes that defend the protist host against potential predators, namely in symbiontids and in the ciliate
Euplotidium, where the epibionts are
verrucomicrobia that eject genetic material as a defense mechanism. There are also some species of oxymonads whose epibionts function as
chemosensors, providing their host with information on the surrounding chemical gradient. Besides algae, occurrence of mutualistic eukaryotic symbionts is rare among protists. In the genus
Neoparamoeba, some species have endosymbionts that resemble
Perkinsela amoebae, a species of trypanosomatids. Although no benefits are yet known from this association, their
evolution matches almost perfectly, suggesting that the symbionts are inherited. == Life cycle and reproduction ==